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Dashboard: http://decor.nictiz.nl/apps/public-repo
View: http://decor.nictiz.nl/apps/public-repo/retrieve.html

Description: contains the latest stable versions of everything. Stability is guaranteed. See Release_channel_dev for information on the development releases.

ART Advanced Requirements Tooling

The ART web application is the main web application of ART-DECOR. It contains required logic for CRUD operations on DECOR files and various other related parts

2014-12-22 version 1.2.15

• Concept search: Add name to search result when searching by id and target is inherited

2014-12-10 version 1.2.14

• Add new variable $get:strDecorServices to support DECOR services 1.2.3

2014-12-08 version 1.2.13

• Datasets: Removed Delete button from treeview
• Datasets: Fixed error when clicking a concept in the diagog with treeview of a similar group

2014-12-01 version 1.2.12

• Template viewer now has button "Set status to cancelled"
• Dataset description is now in an accordeon to keep focus on dataset contents

unified procedure. Having two caused maintenance issues. Having one solves that with little added complexity.

• Template editor: new templates now respect default base id better
• Template editor: Now retains element/@id if available which is useful for mode version/adapt
• Template editor: Fixes bug for attributes in building merged templates that caused @originalOpt to go missing
• Template editor: Adds missing support for conformance C
• Template editor: rolled creating templates (new/version/adapt) and saving templates into 1 unified procedure. Having two caused maintenance issues. Having one solves that with little added complexity.

2014-11-23 version 1.2.11

• Don't offer to add id's when the template is a referenced template
• Fixed creation of template associations on referenced templates [SF#208]
• Template editor: upon retrieval of prototypes check cache first [SF#207]

2014-11-22 version 1.2.10

• Datasets/scenarios/terminology/home: performance updates by loading usage and issues asynchronously and displaying … while loading. This does not interfere with core functionality and lets the user switch context a lot faster.
• Templates that need to come from a different server no longer gives an error when retrieval fails. They just turn up empty
• Template prototype list now has templates listed on first classification only (was "all")
• Datasets: now saves inherit to original concept only. For the top level this was already covered by returning original concepts only as similar items, but for groups with inheritance at lower levels this check was bypassed. Now checks at every upon save
• Datasets: saving now keeps concept/@officialReleaseDate if present (ART doesn't support view or edit yet)
• RetrieveTransaction/RetrieveDataset shortName: replace '?' with 'q', names occur quitre often with and without '?' in datasets, i.e. 'Auto-immuun aandoening?' and 'Auto-immuun aandoening'
• art-decor.xqm: removed unused function art:prepareConceptForStore

2014-11-18 version 1.2.9

• Dataset editor: Fixes an eternal loop situation upon inheriting a group

2014-11-18 version 1.2.8

• ClaML based terminologies are now parsed better for their names
• Orbeon 4.x fixes: explicitly cast to xs:date or xs:dateTime, variable scoping problem fixed in menu builder, css updates, etc.
• Template editor: now respects the default base id for templates better

2014-11-17 version 1.2.7

• Template editor: Now retains element/@id if available which is useful for mode version/adapt
• Template editor: Fixes bug for attributes in building merged templates that caused @originalOpt to go missing
• Template editor: Adds missing support for conformance C

2014-11-11 version 1.2.6

• Improved attributes on concept-usage so the usage views have better underlying data.
• RetrieveTransaction: fix for useLocalAssets and the link on value sets

2014-11-10 version 1.2.5

• Updated all views where cardinality/conformance is shown. NP overrides cardinality, mandatory overrides required
• Updated Dutch translations for conformance Required and Mandatory
• Project now only lists status for releases, not for versions

2014-11-09 version 1.2.4

• Valueset viewer: improved sorting by checking displayName first and name second
• Valueset viewer: added error message when valueset-list retrieval fails
• Dataset viewer: no longer shows similar concepts after searching, but only in edit mode
• Dataset viewer: fixed finding the object by excluding issues
• Issues: fixed searching for objects after update in search-api
• Datasets now come up sorted on effectiveDate (descending) and newest is picked rather than latest/final (datasets, community, template-mapping, terminology)

2014-11-08 version 1.2.3

• Fixed ticket#204: https://sourceforge.net/p/artdecor/tickets/204/

2014-11-06 version 1.2.2

• Database: restored index on decor/core as it caused the template editor to break
• Template viewer: Fixed a bug in rendering >1 "text" elements that caused failure to display at all
• Value set viewer: usage now comes up reliably when asked for a specific version

2014-11-05 version 1.2.1

• Template editor removed check on max >= min as in some cases this would be triggered in error leaving the user without option to save.
• Performance updates. Split decor indexes into 3 parts (cache, data, releases).
• Expanded template retrieval now correctly resolves non-local includes
• Transaction editor: fixed logo and menu

2014-11-04 version 1.2.0

• Moved user-settings from home to a separate page. Click on your name after login to get there
• Improved display of concept usage when usage occurs in a dataset. Now includes the path to occurrences
• Dataset editor now includes support for de-referencing conceptLists while preserving terminology associations (referencing a conceptList was never supported through ART but is possible in the DECOR format)
• Dataset editor now implements the full status machine. Upon applying a new status you may apply that recursively to all child concepts with the same status.
• Dataset editor now only allows inheriting full groups and no longer lets you choose. Even after inheriting it is no longer possible to move other concepts into it as long as you do no deinherit the group.
• Scenario editor now implements the full status machine. Upon applying a new status you may apply that recursively to all child concepts with the same status.
• Scenario viewer/editor now allows filtering on dataset
• Transaction representing templates now have concept usage the concept details
• All template lists are now harmonized and display based on classification first and with proper status icons. Note that this may mean that a template occurs multiple times in the list if multiple classifications exist
• You may now refresh the list of value sets from terminology to create a new binding rather than refreshing the page
• Template editor no longer allows saving when you define an attribute twice
• Value set editor and Terminology association now support status on concepts that come from ClaML. ClaML doesn't support status directly, but Meta key name='statusCode' server that purpose in ART-DECOR. Current terminologies contain active concepts only, but given a use case this may now be different in new terminologies.
• Issues with status feedback are now by default in the initial list
• Extended language support / customization for administrators
  • Edits made in ART (language-support) are preserved between package updates. You can see which ones you have edited locally and revert to the default version
  • You may now add new languages
  • Language support adds support for menu items
  • ART server-settings now includes switch for custom menu file and adding your own logo
  • Updated ART_maintenance_manual with explanation for these features
• Preparations for migration to latest Orbeon version. Type casting on null for xs:dateTime is now prevented

2014-10-20 version 1.0.36

• Dataset editor now allows inheriting from both local and repository concepts
• patched ART variables (/modules/art-decor-settings.xqm) used from XIS:
  • Added string variable to CDA stylesheet

2014-10-16 version 1.0.35

• patched ART variables (/modules/art-decor-settings.xqm) used from XIS:
  • Updated setting $get:strXisData to concat($get:root,'/xis-data') to align with all other *Data variables
  • Added former string under $get:strXisData as $get:strXisHelperConfig concat($get:strXisData,'/data')

2014-10-14 version 1.0.34

• Template editor: now supports adding elements/attributes "before" the selected item

2014-09-24 version 1.0.33

• Fixed dataset edit bug that could cause inadvertent deletion of concepts upon Cancel of editing

2014-09-23 version 1.0.32

• Fixed a bug in adding data element objects to an issue which caused ignore of selected dataset

2014-09-22 version 1.0.31

• Terminology adds refresh of value set list to get new value sets without refreshing the full page

2014-09-17 version 1.0.30

• Added missing function local:getOriginalConcept

2014-09-15 version 1.0.29

• Fixed a number of concept search problems in the search api. Total count was off, prefix not totally respected
• Added path of a concept in the dataset to the output of the search api function
• Added generated path of the concept to the search drop down of mycommunity/dataset/terminology forms
• Added generated path of the concept to the similar concepts on the datasets form
• Added generated path of the concept to the concepts on the issues form when adding a concept as object

2014-09-15 version 1.0.28

• Made display of concepts usage more useful when usage is in datasets by adding the path to the view in place of the dataset effective date.

2014-09-08 version 1.0.27

• Fixed language drop down for projects with one or more languages not in the ART package
• Interface tweaks in project creation (decor-admin)

2014-09-05 version 1.0.26

• Fixed bug when switching an existing concept from any other type to code or ordinal would not give you a concept list to expand

2014-09-05 version 1.0.25

• Fixed logo lookup. The logo may be retrieved dynamically upon page load (e.g. ClaML). The xsls however assumed that the logo would be hard coded in the form.
• Added styles for issue status

2014-08-28 version 1.0.24

• Bugfix in handling of issues labels when selected on issues form. Now any match is returned not just exact match

2014-08-27 version 1.0.23

• Upon saving an edited valueSet, don't save @projectPrefix

2014-08-27 version 1.0.22

• Adds status 'feedback' to the default list of selected statuses on issues form

DECOR core files

DECOR-core contains definitions for the DECOR format in XSD, transformations that produce HTML/Schematron/Wiki etc.

2015-01-06 version 1.2.8

• coreschematron ANY: Allow datatype ANY with nullFlavor OTH and (new: additionally) NA to have originalText elements as a child
• DECOR.xsd/DECOR2html/DECOR2wiki: Now adds support for governance groups
• Changed default publishing format from HTML 4.0 to XHTML 1.1
• Various improvements in links in publication

2014-12-01 version 1.2.7

• DECOR.xsd schematron fixes for template associations on referenced templates.
• DECOR2html/Template2html: Fixed small problems in Template metadata display in html

2014-11-23 version 1.2.6

• DECOR.xsd schematron fixes for template associations on referenced templates.
• Added schematron check for template relationship @model + @type='DRIV'
• Fixed schematron when checking required attributes. These checks were not generated.
• Changed check for required attributes. No longer checks length >0. This duplicates the check based on datatype which is a waste of resources.
• Fixed somewhat misleading error text when a code doesn't match the defined value
• Fixed error in schematron creation for attributes of type 'ts'
• Updated Dutch translations for conformance Required and Mandatory
• Improved issues.html so links to details are more obvious
• Fixed bug in schematron engine that generated illegal expressions for checking datatypes oid and uuid
• Updated for German in DECOR.xsd and i18n file for HTML and schematron
• Improved rendering of examples in DECOR2html
• Improved rendering of contained template cardinality in DECOR2html
• HTML/Schematron predication improved for templates with >1 templateId. No longer assumes " or ", but now assumes " and ". Note that only templateId elements with @minimumMultiplicity > 0 were/are considered

2014-11-18 version 1.2.5

• Added schematron check for template relationship @model + @type='DRIV'
• Fixed schematron when checking required attributes. These checks were not generated.

2014-11-12 version 1.2.4

• Changed check for required attributes. No longer checks length >0. This duplicates the check based on datatype which is a waste of resources.
• Fixed somewhat misleading error text when a code doesn't match the defined value
• Fixed error in schematron creation for attributes of type 'ts'

2014-11-10 version 1.2.3

• Updated Dutch translations for conformance Required and Mandatory

2014-11-09 version 1.2.2

• Improved issues.html so links to details are more obvious

2014-11-08 version 1.2.1

• Fixed bug in schematron engine that generated illegal expressions for checking datatypes oid and uuid

2014-11-04 version 1.2.0

• DECOR definition updated
  • @code may now be 128 characters, was 64 but proved too small for SNOMED-CT expressions
  • @codeSystem may no longer be 'nullFlavor' but shall be OID
  • Templates DSTU update: statuses 'inactive' and 'update' are no longer supported
  • various schematron rules have been relaxed to only fire on places that are draft/new you may actually still fix them
• Schematron and HTML publication engine improvements for referenced templates, prohibited attributes, and codeSystemName
• Language updates for HTML / Schematron

2014-09-22 version 1.0.5

• Fixes a bug that prevented templateAssociations to be displayed in HTML publications

DECOR example files

DECOR example files

2014-11-04 version 1.2.0

• Administrative rename

2014-10-29 version 1.0.7

• Fixed missing conceptLists in the demo5 dataset

2014-10-10 version 1.0.6

• Fixed a problem in publishing demo5 (missing restURIs)
• Added missing name in en-US for the dataset in demo5
• Added missing terminology association in demo1
• Fixed English displayName on concept in demo1

DECOR services

REST services for DECOR

2015-01-06 version 1.2.4

• RetrieveTransaction: Fixed meta header for charset and media type
• RetrieveTransaction: Fixed missing expiration date in cookie
• RetrieveTemplate: Fixes, tweaks and syncs for Retrieve Template service
• Retrievetemplate: Now with format raw to get template unexpanded
• ProjectIndex: Removed Xpath intermediate format from ProjectIndex.xquery.
• Sort ProjectIndex/transactions on dataset effectiveDate.

2014-12-10 version 1.2.3

• ProjectIndex/DatSetIndex/TransactionIndex/TemplateIndex: Fixes logo behavior in cases of multiple logos, no logos, or no visible logos. depends on ART package version 1.2.14 for variable $get:strDecorServices

2014-12-01 version 1.2.2

• RetrieveTransaction: Fixed display of Codes column when derived from a valueSet. Now includes the level hierarchy and visual distinction between Abstract, Specializable, Deprecated and Leaf
• All services: fixed path problem on CSS/JS/img when you retrieve for local (DECOR2schematron) but without useLocalAssets=true
• Fixed link on templates in ProjectIndex
• Fixed display of referenced templates in ProjectIndex
• Added html link on templates in ProjectIndex
• Transaction group diagram now has the model on the message arrows it displays

2014-11-05 version 1.2.1

• Added try/catch around displayName retrieval for codes. Returns no displayName in case of error. This is usually due to missing codesystems or local codesystems

2014-11-04 version 1.2.0

• RetrieveDataSet / RetrieveTransaction updates
  • includes both concept terminology and concept value terminology, improved display of value set bindings
  • allows moving columns in any particular order
  • allows client side searching where non matching contents are hidden

Version 1.0.2

Read more information, or download DECOR-services-1.0.2.xar.

ART-DECOR System Services

ART-DECOR System Services provides resources related to ART-DECOR system services like ADANS (automatic notifier system) and ADRAM (release and release manager)

2014-12-22 version 1.2.1

• Fixed markup (mail clients do not read header css)

2014-11-04 version 1.2.0

• ADANS improved notification text
• ADANS notifications now includes labels when applicable
• ADANS no longer sends notifications to the last editor of the issue as he already knows
• ADANS
• (for admins) ADANS now calls all strings from the ART package
• (for admins) ADANS improved debugging/testing options

Version 1.0.3

Read more information, or download ART-DECOR-system-services-1.0.3.xar.

Terminology Applications

Terminology explorers

2015-01-08 version 1.2.2

• Fixed bug with display of draft concepts

2014-11-18 version 1.2.1

• ClaML based terminologies are now parsed better for their names

2014-11-04 version 1.2.0

• ClaML based terminologies now support status through Meta key name='statusCode' through View and Search
• Numerous SNOMED-CT management and publication improvements

2014-09-29 version 1.0.8

• Fixed bug creating 'undotted' ICD10 code.
• Added daily system job for activating and retiring of objects.
• Fixed bug preventing selection of DBC for AGB if retired DBC for this AGB is already present.
• Changed query and controller to work with Snomed extension.

2014-09-23 version 1.0.7

• DHD:
  • removed check on expirationDate
  • Removed ICD10 sorting by @no.
  • Changes for datamodel 3.0
• SNOMED CT: Fixed display of double preferred terms and missing preferred terms.

2014-09-17 version 1.0.6

• Various SNOMED CT and DHD Thesaurus Editor fixes

2014-09-10 version 1.0.5

• Fixed bug with id search for NL extension concepts without preferred term. (SNOMED CT)

2014-08-27 version 1.0.4

• Upon install only write index files and reindex when they are different
• Improved collection creation when path does not exist yet (we were missing /db/system/config/db/apps/terminology-data)

XIS Test information system

Client and server test information system

2015-01-06 version 1.2.9

• Rename various functions to facilitate fix-permissions

2015-01-06 version 1.2.8

• Rewrote account data deletion so everything goes through delete-account-data.xquery
• Account data deletion on Messages form now goes through a dialog as protection
• Account data deletion now supports full account data delete in addition to deletion on a per file basis.

2014-12-22 version 1.2.7

• Support conditional adding of query parameters (only when valued.
• Support parameter mostRecentDispenseForEachRxIndicator on QURX_IN990111NL

2014-12-20 version 1.2.6

• Messages: add QURX_IN990101NL02 as query
• Messages: Allow application-id and organization-id override when sending files (useful mostly for ART-DECOR account)
• Install: Fixes xis accounts too if possible.
• Messages: Return accounts for guest too when logged in

2014-12-04 version 1.2.5

• api-permissions.xqm: copied/adapted local:setArtQueryPermissions to local:setXisQueryPermissions to set permissions based on xquery name

2014-12-04 version 1.2.4

• Files are now all listed and not only if they contain messages we know
• Added button to view contents of a file

2014-11-18 version 1.2.3

• Orbeon 4.x fixes: explicitly cast to xs:date or xs:dateTime

2014-11-11 version 1.2.2

• HTML viewer for messaging: Adds B64 rendering for hl7:text elements comparable to hl7:value
• Retrieving and Rendering messages: Fix for retrieval of files with special characters.

2014-11-06 version 1.2.1

• Messages form: fixed problem getting file meta data

2014-11-04 version 1.2.0

• Added option to bulk download messages, ticket #202

2014-10-16 version 1.0.15

• Circumvention of a bug in the path generator function that causes validation/rendering problems for messages in a file with similar siblings of the message

2014-10-16 version 1.0.14

• Updated validation logic to support multiple messages per file each with their own validation status.
• Improved error trapping for more screen guidance after message validation
• HTML version of messages (Dutch only), now has Base64 support when encountered
• Messages and tests no longer show messages inline, but feature a button for a separate window. This significantly boosts performance and prevents interference with data tables on the same forms.
• (for admins) The Test-accounts setting "Show XML" is no longer useful and is ignored. It will be removed at some point
• Bug fixed that caused empty testseries.xml in test accounts after pressing save in Test Accounts
• Improved reliability of HTML display of messages
• Various smaller fixes

2014-10-16 version 1.0.13

• Updated list of supported queries
• Added interactions and patient 999911624
• Updated resources vocab

2014-10-02 version 1.0.12

• Fix for display of Contact with multiple components and differing sequenceNumbers

2014-10-01 version 1.0.11

• When rendering a message in HTML, start rendering from first interaction or ClinicalDocument

2014-09-18 version 1.0.10

• Fixed initialization for the messages tab dropdown menus

2014-09-10 version 1.0.9

• Updated list of supported queries

2014-09-05 version 1.0.8

• Fixed rare situation where file-list retrieval would fail because of a missing messages collection under a test account

OID Registry tools

OID Registry tools. OID Registries are a basic building block for other parts of ART-DECOR.

2014-11-04 version 1.2.0

• Administrative rename

Version 1.0.3

ADA - ART DECOR Applications

ADA is a toolkit for building applications from DECOR specifications. It is useful for rapid prototyping, test-driving functional specifications and as a starting point for serious development.

2014-11-04 version 1.2.0

• Administrative rename

2014-09-29 version 0.8.2

• Better hints on errors.
• Better configuration for locations of exist etc.
• Check that empty strings are really empty.
• More modular location configuration in conf.xml.
• A separate ADA login (for non-ART systems).
• Cleaning of @hidden elements. Fixed bug, now code/codeSystem are saved.
• Proper handling of insert/delete of x..* concepts, regardless of nesting depth. Also x..* concept items are now properly supported.
• Fixed bug in post-install

ART-DECOR Template Editor

DECOR Temple Editor is the advanced version of the default version contained in ART. It allows direct manipulation of the underlying definition in XML. It supports content completion, and validation of the definition before saving. Temple is in its alpha stage.

2014-11-23 version 1.8.4

• Give a proposed default value for id and effectiveDate in new template.
• Made editor global variable for access by all functions.
• First shot a template-from-concept generator. Code still in flux. Intent: select a concept, apply a stylesheet from xslt collection to make draft template. Simply add stylesheet to /xslt to change behavior.

2014-11-04 version 1.8.3

• Updated code mirror
• Added incubator functions for rapid creation of observation templates from a concept

Version 0.9.1

Read more information, or download ART-temple-0.9.1.xar.

HL7: CDA Release 2 XML materials

CDA Release 2 files. XML Schema, XSL, instances

2014-11-04 version 1.2.0

• cda.xsl updated. See full documentation or download the materials

2014-10-20 version 1.0.3 Fixed support for recordTarget/patient extensions deceasedInd/deceasedTime and multipleBirthInd/multipleBirthOrderNumber. They were inadvertently called in the HL7 namespace. 2014-10-13 version 1.0.2 Fixed @ID by adding it to whatever in scope element (div, sup, sub, a, etc.) as @id. To this end the separate calls were replaced by a central call in mode 'handleSectionTextAttributes'. 2014-10-02 version 1.0.1 Fixed linkHtml support and links to CDA.xsd in the example files

HL7: demo5 - vital signs XML materials

demo5 XML-materials

Version 0.1.0

Read more information, or download hl7_demo5-0.1.0.xar.

Terminology: ATC Data

ATC Data

Version 0.6.2

Read more information, or download terminology-atc-data-0.6.2.xar.

Terminology: HL7 Data

HL7 Data - generated from RIM 2.40.7 / CoreMIF DEFN=UV=VO=1175-20120802 (HL7 Normative Edition 2013) with only active code systems.

Version 1175-20120802

Read more information, or download terminology-hl7-data-1175-20120802.xar.

Terminology: ICD-10 DE Data

ICD-10 DE Data package

Version 1.1.1

Read more information, or download terminology-icd10-de-data-1.1.1.xar.

Terminology: ICD-10 NL Data

ICD-10 NL Data package

2014-10-29 version 1.1.2

• Added agreed upon OID 2.16.840.1.113883.6.3.2

Terminology: ICD-10 US Data

ICD-10 US Data package

Version 1.1.1

Read more information, or download terminology-icd10-us-data-1.1.1.xar.

Terminology: ICF NL Data

ICF NL data package

Version 0.6.4

Read more information, or download terminology-icf-nl-data-0.6.4.xar.

Terminology: ICF NL Data

ICF NL data package

Version 0.6.4

Read more information, or download terminology-icf-nl-data-0.6.4.xar.

Terminology: ICPC-1-NL Data

ICPC-1-NL Data as maintained by the Dutch NHG

2014-11-04 version ICPC-1-NL 2013

• Includes all deprecated concepts from 2000, 2002, 2009 as well

Terminology: LOINC data

LOINC data package

2014-10-14 version 2.48.1

• LOINC 2.48

Terminology: RadLex Data

RadLex

Version 3.9.3

Read more information, or download terminology-RadLex-data-3.9.3.xar.

Terminology: SNOMED CT Data

SNOMED CT Data

Version 14.1

Read more information, or download terminology-snomed-data-14.1.xar.